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Deconstructing an Ichnology Abstract, with Alligators

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Many people from outside of the realm of academia (or is it a fiefdom?) prefer to get the latest scoops on new paleontological or geological research directly from the source, rather than just reading a press release or news article about it. As someone looking from the inside out, I’m pleased to see so many non-scientists try to probe one layer deeper with their understanding of a beloved scientific topic that interests them, and I try to encourage it through my own blogging, speaking, teaching, and other forms of outreach.

An alligator den on St. Catherines Island, (Georgia), with baby alligator and “big momma” alligator for scale. This week, I presented a poster with about these big burrows and their makers  at the Society of Vertebrate Paleontology meeting in Raleigh, North Carolina. The original field work we did for this research was reported back in March here, and now we’re ready to share more of what we found out. (Photograph by Anthony Martin.)

Unfortunately, many of the original research articles that become subjects of media attention are behind paywalls, requiring a reader to pay for access to read those articles, even if the research was publicly funded. This practice is especially common if the research is published in one of those glamorous journals that seemingly make or break academic careers in science, regardless of the lasting quality of the research. (I won’t name them directly, but let’s just say that’s the nature of science nowadays.)

So one option for these curious folks is to read abstracts from proceedings volumes of professional meetings. Abstracts, which ideally are succinct summaries highlighting the most significant findings of a given study, can thus serve as a way for the public to at least get a few insights on the latest scientific research happening in their favorite disciplines.

Want to get below the surface with this research? Oh, sorry, I was just being metaphorical. You really don’t want to go below the surface of an alligator den, which is why we mostly studied abandoned ones, mapped them, and otherwise tried to use methods that didn’t bother the alligators or otherwise have uncomfortable encounters with them.

Along those lines, the annual meeting of the Society of Vertebrate Paleontology (SVP) has been taking place this week in Raleigh, North Carolina, and it has an abstract volume associated with the meeting. Regrettably, though, the general public does not have access to these abstracts, only SVP members and people who have registered for the meeting. The Society of Vertebrate Paleontology also has a policy regarding researchers who publicly share their research results based on these abstracts, muddied by the word “embargo.” In short, this policy holds that people working for the media, which include reporters and bloggers (the latter of whom are also sometimes reporters), cannot write about and otherwise publicize research results presented at the meeting. That is, unless the researchers have given their permission to do so, or the results have been freely distributed by the researchers through a press release, blog, or other forms of outreach.

So in the spirit of the public having easier access to this primary scientific information, the following is our SVP abstract, which I presented as a poster at the meeting yesterday. The abstract is co-authored with Michael Page (Emory University), Sheldon Skaggs (Georgia Southern University), and R. Kelly Vance (also Georgia Southern University), and we worked together on the research, writing, and editing of the abstract. Because this abstract also includes a lot of scientific shorthand (charitably referred to as “jargon”), I also included a sentence-by-sentence explanation of it, in which the abstract text is in italics and my explanation is in formal typeface. So I hope you, the gentle reader, get something from this exercise in explanation, and we look forward to sharing more of this research with you as it continues to evolve and we publish it sometime next year as a peer-reviewed paper.

DENS OF THE AMERICAN ALLIGATOR (ALLIGATOR MISSISSIPPIENSIS) AS TRACES AND THEIR PREDICTIVE VALUE FOR FINDING LARGE ARCHOSAUR BURROWS IN THE GEOLOGIC RECORD

MARTIN, Anthony J., Emory University, Atlanta, GA, United States; PAGE, Michael, Emory University, Atlanta, GA, United States; SKAGGS, Sheldon, Georgia Southern University, Statesboro, GA, United States; VANCE, Robert K., Georgia Southern University, Statesboro, GA, United States

Large archosaur burrows are rarely interpreted from the geologic record, a circumstance that may be attributable to a lack of search images based on modern examples, rather than actual rarity.

Archosaurs make up an evolutionarily related group of vertebrates that include crocodilians (alligators and crocodiles), dinosaurs (the non-bird ones, that is), birds, and their extinct relatives. A few of the larger extinct archosaurs may have dug burrows, but paleontologists have reported very few of these, with one exception being the small Cretaceous ornithopod dinosaur Oryctodromeus cubicularis, found in its burrow with two juveniles of the same species. The authors are proposing here that this “rarity” of archosaur burrows in the fossil record might be more attributable to paleontologists not knowing what modern archosaur burrows look like. So they don’t recognize the fossil ones, leading to a perceived rarity rather than an actual one.

To test this idea, we measured, imaged, and mapped den structures of the American alligator (Alligator mississippiensis) on St. Catherines Island (Georgia, USA).

By “measured,” I mean that my colleagues and I used a low-tech instrument known as a “tape measure” to assess the width and height of an alligator den entrance. By “imaged,” we used a much more technologically complex instruments and method, called ground-penetrating radar (GPR) in combination with computers to figure out what these dens looked like below the surface. By “mapped,” I mean that we looked for alligator dens on St. Catherines Island (Georgia) and recorded their locations using a handheld GPS (global positioning system) unit, then plotted the distribution of these points to see if any patterns emerged.

St. Catherines is an undeveloped barrier island on the Georgia coast, consisting of Pleistocene and Holocene sediments.

St. Catherines Island is undeveloped in the sense that very few buildings or people live on the island year-round. It is privately owned and reserved for researchers’ uses under the direction of the St. Catherines Island Foundation. Like most of the Georgia barrier islands on the southern part of its coast, St. Catherines also has a geologically complex history. Its northwestern end is made of sediments deposited about 40,000 years ago – during the Pleistocene Epoch – whereas its southeastern end is made of much more recent sediments from the Holocene Epoch.

Alligators dug most dens along the edges of freshwater ponds in loosely consolidated Holocene or Pleistocene sand.

This sentence doesn’t need much more explanation other than to reemphasize that alligators gravitate to freshwater ecosystems to dig their dens (pictured below), not saltwater ecosystems, like salt marshes or coastal dunes.

Adult female alligators use dens to protect offspring, but burrows also aid in thermoregulation or serve as refugia for alligators during droughts and fires.

This is probably the neatest insight we gained from doing the research, is that the dens aren’t just used by big momma ‘gators for raising baby ‘gators, but also to make sure alligators of all ages are cozy during winters, stay wet during droughts, and are safe from fires. For instance, because southern Georgia has been going through a drought the past few years, some of the occupied dens we saw were in places that were high-and-dry, but the dens themselves intersected the local water table (seen in one photo above).

Some dens are evidently reused and modified by different alligators after initial construction.

This is an important point for paleontologists to know, and probably shouldn’t have been buried so far into the abstract, but we couldn’t very well put it at the beginning, either. Dens, like other homes, get used again, and probably by generations of alligators. This means that once a den is dug, stays open, and has a wetland nearby, alligators may just move into an abandoned den and modify it if needed, an alligator form of “home improvement.”

Drought conditions along the Georgia coast have exposed many abandoned dens, thus better allowing for their study while increasing researcher safety.

The drought is bad for alligators but was good for us when we did our field work, because so many dens were abandoned and exposed on dry land. This also eased any concerns we had about bothering the alligators, but especially alleviated worries we might have had about close encounters with protective parents near occupied dens. To be sure, we ran into a few of those, but not as many as we would have if conditions had been wetter.

Den entrances have half-moon cross-sections, and based on one sample (n = 20), these range from 22-115 cm wide (mean = 63 + 23 cm) and 14-55 cm high (23 + 9 cm).

I like throwing numbers into ichnology, just to remind people that this is a part of it as a science. Although our sample size is small compared to other studies of traces and trace fossils, it gives people an idea of the range of sizes of these dens, or at least their entrances. As an exercise in the imagination, think about whether you could squeeze into one of these. You know, if you were crazy enough to do such a thing.

In addition to field descriptions, we applied geographic information systems (GIS) and ground-penetrating radar (GPR) to help define the ecological context and subsurface geometry of these structures, respectively.

Computer-aided mapping methods like GIS helped us to test how alligators decided to make dens as a function of the landscape. For instance, we found most of their dens were in lower-elevation areas, which made sense when you think about water accumulating in those places. And the GPR served the dual purpose of not bothering the alligators if they were in their dens, while also keeping us away from their, um, denizens. (Sorry.)

GIS gave spatial data relatable to alligator territoriality, substrate conditions, and proximity to potential nest sites. GPR produced subsurface images of active dens, which were compared to abandoned dens for a sense of taphonomic history.

Big alligators tend to stay away from other big alligators. They also tend to burrow in sediments that don’t take too much effort for them. Female alligators also make their nests close to water bodies and dens, so their little tykes don’t have to travel so far to the water. Newer, active dens were also compared to those no longer being used to see what happens to them over time with neglect, kind of like how an old, abandoned house tends to fall apart and collapse on itself over time.

Most den entrances are southerly facing, with tunnels dipping to the northwest or northeast.

This is pretty self-explanatory, but I’ll just ask readers to think about why these dens are oriented like this.

From entrances, tunnels slope at about 10-15°, turn right or left within a meter, and lead to enlarged turn-around chambers.

Pure description here too, but by “turn-around chamber,” that means the den has enough room inside the den for a big adult alligator to go in head-first and turn around so that it’s head is right at the entrance. (See the photo of “big momma” at the top for an example of that.)

Collapsed dens in formerly ponded areas (secondary-succession maritime forests) provided further insights into subsurface forms of these structures.

Dens left high-and-dry from years ago and taken over by forests collapsed in a way that we could see the full outline of the den and measure these.

These features are: 3.1-4.6 m long; 30-40 cm deep, relatively narrow at either end (35-60 cm), and 1.2-1.6 m wide in their middles.

Dude. Those are big burrows. Dude.

Expansive areas were probable turn-around chambers, and total volumes of collapsed dens accordingly reflect maximum body sizes of their former occupants.

The bigger the den, the easier it was for a large occupant to turn around in it. And although smaller, younger alligators could have lived in these dens, some of the dens were too small to allow the really big alligators from moving into them.

One sampled area (8,100 m2), an almost dry former pond, had 30 abandoned dens, showing how multiple generations of alligators and fluctuating water levels can result in dense concentrations of alligator burrows over time.

Think of an area about the size of an American football field, and put 30 alligator dens in that area. (Now that would make for an interesting game, wouldn’t it?) These dens weren’t all made at the same time, though, and were constructed or abandoned as the pond filled or dried out, respectively.

In summary, the sheer abundance, distinctive traits, and sizes of these structures on St. Catherines and elsewhere in the Georgia barrier islands give paleontologists excellent search images for seeking similar trace fossils made by large semi-aquatic archosaurs.

That’s the big take-home message here for vertebrate paleontologists. All of the information we gathered about these alligator dens from the Georgia barrier islands, especially what they look like, can be applied to test the fossil record of archosaurs. In other words, did archosaurs actually leave lots of dens for us to find, but we just didn’t know what to look for? Hopefully we’ll find out because of this research.

Later, denning ‘gator. (Photograph by Anthony Martin, taken on St. Catherines Island, Georgia.)

(Special thanks to Ruth Schowalter for assisting with the field work, and to the St. Catherines Island Foundation for funding some of the research.)

Source of Abstract (Reference):

Martin, A.J., Page, M., Vance, R.K., and Skaggs, S. 2012. Dens of the American alligator (Alligator mississippiensis) as traces and their predictive value for finding large archosaur burrows in the geologic record. Journal of Vertebrate Paleontology, 32 [Suppl. to No. 3]: 136.


 

 

Into the Dragon’s Lair: Alligator Burrows as Traces

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American alligators (Alligator mississippiensis) tend to provoke strong feelings in people, but the one I encounter the most often is awe, followed closely by fear. Both emotions are certainly justifiable, considering how alligators are not only the largest reptiles living on the Georgia barrier islands, but also are the top predators in both freshwater and salt-water ecosystems in and around those islands. I’ve even encountered them often enough in maritime forests of the islands to regard them as imposing predators in those ecosystems, too.

Time for a relaxing stroll through the maritime forest to revel in its majestic live oaks, languid Spanish moss, and ever-so-green saw palmettos. Say, does that log over there look a little odd to you? (Photo by Anthony Martin, taken on St. Catherines Island.)

But what many people may not know about these Georgia alligators is that they burrow. I’m still a little murky on exactly how they burrow, but they do, and the tunnels of alligators, large and small, are woven throughout the interiors of many Georgia barrier islands. Earlier this week, I was on one of those islands – St. Catherines – having started a survey of alligator burrow locations, sizes, and ecological settings.

Entrance to an alligator burrow in a former freshwater marsh, now dry, yet the burrow is filled with water. How did water get into the burrow, and how does such traces help alligators to survive and thrive? Please read on. (Photograph by Anthony Martin and taken on St. Catherines Island, Georgia.)

In this project, I’m working cooperatively (as opposed to antagonistically) with a colleague of mine at Emory University, Michael Page, as well as Sheldon Skaggs and Robert (Kelly) Vance of Georgia Southern University. As loyal readers may recall, Sheldon and Kelly worked with me on a study of gopher tortoise burrows, also done on St. Catherines Island, in which we combined field descriptions of the burrows with imaging provided by ground-penetrating radar (also known by its acronym, GPR). Hence this project represents “Phase 2” in our study of large reptile burrows there, which we expect will result in at least two peer-reviewed papers and several presentations at professional meetings later this year.

Why is a paleontologist (that would be me) looking at alligator burrows? Well, I’m very interested in how these modern burrows might help us to recognize and properly interpret similar fossil burrows. Considering that alligators and tortoises have lineages that stretch back into the Mesozoic Era, it’s exciting to think that through observations we make of their descendants, we could be witnessing evolutionary echoes of those legacies today.

Indeed, for many people, alligators evoke thoughts of those most famous of Mesozoic denizens – dinosaurs – an allusion that is not so farfetched, and not just because alligators are huge, scaly, and carnivorous. Alligators are also crocodilians, and crocodilians and dinosaurs (including birds) are archosaurs, having shared a common ancestor early in the Mesozoic. However, alligators are an evolutionarily distinct group of crocodilians that likely split from other crocodilians in the Late Jurassic or Early Cretaceous Period, an interpretation based on both fossils and calculated rates of molecular change in their lineages.

Archosaur relatives, reunited on the Georgia coast: great egrets (Ardea alba), which are modern dinosaurs, nesting above American alligators (Alligator mississippiensis), which only remind us of dinosaurs, but shared a common ancestor with them in the Mesozoic Era. (Photograph by Anthony Martin, taken on St. Catherines Island, Georgia.)

Along these lines, I was a coauthor on a paper that documented the only known burrowing dinosaur – Oryctodromeus cubicularis – from mid-Cretaceous rocks in Montana. In this discovery, we had bones of an adult and two half-grown juveniles in a burrow-like structure that matched the size of the adult. I also interpreted similar structures in Cretaceous rocks of Victoria, Australia as the oldest known dinosaur burrows. Sadly, these structures contained no bones, which of course make their interpretation as trace fossils more contentious. Nonetheless, I otherwise pointed out why such burrows would have been likely for small dinosaurs, especially in Australia, which was near the South Pole during the Cretaceous. At least a few of these reasons I gave in the published paper about these structures were inspired by what was known about alligator burrows.

Natural sandstone cast of the burrow of the small ornithopod dinosaur, Oryctodromeus cubicularis, found in Late Cretaceous rocks of western Montana; scale = 15 cm (6 in). (Photograph by Anthony Martin, taken in Montana, USA.)

Enigmatic structure in Early Cretaceous rocks of Victoria, Australia, interpreted as a small dinosaur burrow. It was nearly identical in size (about 2 meters long) and form (gently dipping and spiraling tunnel) to the Montana dinosaur burrow. (Photograph by Anthony Martin, taken in Victoria, Australia.)

What are the purposes of modern alligator burrows? Here are four to think about:

• Dens for Raising Young Alligators – Many of these burrows, like the burrow interpreted for the dinosaur Oryctodromeus, serve as dens for raising young. In such instances, these burrows are occupied by big momma ‘gators, who use them for keeping their newly hatched (and potentially vulnerable) offspring safe from other predators.

Two days ago, Michael and I experienced this behavioral trait in a memorable way while we documented burrow locations. As we walked along the edge of an old canal cutting through the forest, baby alligators, alarmed by our presence, began emitting high-pitched grunts. This then provoked a large alligator – their presumed mother – to enter the water. Her reaction effectively discouraged us from approaching the babies; indeed, we promptly increased our distance from them. (Our mommas didn’t raise no dumb kids.) So although we were hampered in finding out the exact location of this mother’s den, it was likely very close to where we first heard the grunting babies. I have also seen mother alligators on St. Catherines Island usher their little ones through a submerged den entrance, quickly followed by the mother turning around in the burrow and standing guard at the front door.

Oh, what an adorable little baby alligator! What’s that? You say your mother is a little over-protective? Oh. I see. I think I’ll be leaving now… (Photograph by Anthony Martin, taken on St. Catherines Island.)

• Temperature Regulation – Sometimes large male alligators live by themselves in these burrows, like some sort of saurian bachelor pad. For male alligators on their own, these structures are important for maintaining equitable temperatures for these animals. Alligators, like other poikilothermic (“cold-blooded”) vertebrates, depend on their surrounding environments for controlling their body temperatures. Even south Georgia undergoes freezing conditions during the winter, and of course summers there can get brutally hot. Burrows neatly solve both problems, as these “indoor” environments, like caves, provide comfortable year-round living in a space that is neither too cold nor too hot, but just right. The burrowing ability of alligators thus makes them better adapted to colder climates than other crocodilians, such as the American crocodile (Crocodylus acutus), which does not make dwelling burrows and is restricted in the U.S. to the southern part of Florida.

• Protection against Fires – Burrows protect their occupants against a common environmental hazard in the southeastern U.S., fire. This is an advantage of alligator burrows that I did not appreciate until only a few days ago while in the field on St. Catherines. Yesterday, the island manager (and long-time resident) of St. Catherines, Royce Hayes, took us to a spot where last July a fire raged through a mixed maritime forest-freshwater wetland that also has numerous alligator burrows. The day after the fire ended, he saw two pairs of alligator tracks in the ash, meaning that these animals survived the fire by seeking shelter, and further reported that at least one of these trackways led from a burrow. The idea that these burrows can keep alligators safe from fires makes sense, similar to how gopher tortoises can live long lives in fire-dominated long-leaf pine ecosystems.

An area in the southern part of St. Catherines Island, scorched by a fire last July, that is also a freshwater wetland inhabited by alligators with burrows. The burrow entrances are all under water right now, which would work out fine for their alligator occupants if another fire went through there tomorrow. (Photograph by Anthony Martin, taken on St. Catherines Island.)

• Protection against Droughts – Burrows also probably help alligators keep their skins moist during droughts. Because these burrows often intersect the local water table, alligators might continue to use them as homes even when the accompany surface-water body has dried up. We saw several examples of such burrows during the past few days, some of which were occupied by alligators, even though their adjacent water bodies were nearly dry.

For example, yesterday Michael and I, while scouting a few low-lying areas for either occupied or abandoned dens, saw a small alligator – only about a meter (3.3 ft) long – in a dry ditch cutting through the middle of a pine forest. Curious about where alligator’s burrow might be, we approached it to see where it would go. It ran into a partially buried drainage pipe under a sandy road, a handy temporary refuge from potentially threatening bipeds. Seeing no other opening on that side of the road, we then checked the other side of the road, and were pleasantly surprised to find a burrow entrance with standing water in it. This small alligator had made the best of its perilously dry conditions by digging down to water below the ground surface.

Alligator burrow (right) on the edge of a former water body. Notice how water is pooling in the front of the burrow, showing how it intersects the local water table. The entrance also had fresh alligator tracks and tail dragmarks at this entrance, showing that it was still occupied despite the lack of water outside of it. (Photograph by Anthony Martin, taken on Cumberland Island, Georgia.)

Alligator burrows (left foreground and middle background) in a maritime forest, also not associated with a wetland but marking the former location of one. Although the one to the left was unoccupied when we looked at it, it had standing water just below its entrance. This meant an alligator could have hung out in this burrow for a while after the wetland dried up, and it may have just recently departed. Also, once these burrows are high and dry, bones strewn about in front of them also add a delicious sense of dread. Here, Michael Page points at a deer pelvis, minus the rest of the deer. (Photograph by Anthony Martin, taken on St. Catherines Island, Georgia.)

What is especially interesting about the American alligator is how the only other species of modern alligator, A. sinensis in China, is also a fabulous burrower, digging long tunnels there too, which they use for similar purposes. This behavioral trait in two closely related but now geographically distant species implies a shared evolutionary heritage, in which burrowing provided an adaptive advantage for their ancestors.

Thus like many research problems in science, we won’t really know much more about alligator burrows until we gather information about them, test some of the questions and other ideas that emerge from our study, and otherwise do more in-depth (pun intended) research. Nonetheless, our all-too-short trip to St. Catherines Island this week gave us a good start in our ambitions to apply a comprehensive approach to studying alligator burrows. Through a combination of ground-penetrating radar, geographic information systems, geology, and old-fashioned (but time-tested) field observations, we are confident that by the end of our study, we will have a better understanding of how burrows have helped alligators adapt to their environments since the Mesozoic.

Juvenile alligators just outside two over-sized burrows, made and used by previous generations of older and much larger alligators. How might such burrows get preserved in the fossil record? How might we know whether these burrows were reused by younger members of the same species? Or, would we even recognize these as fossil burrows in the first place? All good questions, and all hopefully answerable by studying modern alligator burrows on the Georgia barrier islands. (Photograph by Anthony Martin, taken on Sapelo Island, Georgia.)

Further Reading

Erickson, G.M., et al. 2012. Insights into the ecology and evolutionary success of crocodilians revealed through bite-force and tooth-pressure experimentation. PLoS One, 7(3): doi:10.1371/journal.pone.0031781.

Martin, A.J. 2009. Dinosaur burrows in the Otway Group (Albian) of Victoria, Australia and their relation to Cretaceous polar environments. Cretaceous Research, 30: 1223-1237.

Martin, A.J., Skaggs, S., Vance, R.K., and Greco, V. 2011. Ground-penetrating radar investigation of gopher-tortoise burrows: refining the characterization of modern vertebrate burrows and associated commensal traces. Geological Society of America Abstracts with Programs, 43(5): 381.

St. John, J.A., et al., 2012. Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes. Genome Biology, 13: 415.

Varricchio, D.J., Martin, A. J., and Katsura, Y. 2007. First trace and body fossil evidence of a burrowing, denning dinosaur. Proceedings of the Royal Society of London B, 274: 1361-1368.

Waters, D.G. 2008. Crocodlians. In Jensen, J.B., Camp, C.D., Gibbons, W., and Elliott, M.J. (editors), Amphibians and Reptiles of Georgia. University of Georgia Press, Athens, Georgia: 271-274.

Acknowledgements: Much appreciation is extended to the St. Catherines Island Foundation, which supported our use of their facilities and vehicles on St. Catherines this week, and Royce Hayes, who enthusiastically shared his extensive knowledge of alligator burrows. I also would like to thank my present colleagues and future co-authors – Michael Page, Sheldon Skaggs, and Kelly Vance – for their valued contributions to this ongoing research: we make a great team. Lastly, I’m grateful to my wife Ruth Schowalter for her assistance both in the field and at home. She’s stared down many an alligator burrow with me on multiple islands of the Georgia coast, which says something about her spousal support for this ongoing research.